Mobile elements are those that can be moved from older to newer tissue in plants, while immobile ones cannot. For example, calcium is incorporated into the cell wall, making it immobile and cannot be relocated later. Plants with a relative independence of expansive and structural growth manifest at the cellular scale, where structural growth and biomass change are linked to the plant’s ability to transport nutrients to growing points. This work explores the diversity of mobile genetic elements carried by bacteria associated with plant root surfaces, assessing their capacity to help shape plant growth.
Some nutrients are mobile while others are immobile. The relative movement of nutrients offers a great hurdle for fulfilling basic cellular requirements. Deficiency symptoms can appear in new vegetation when mobile elements become limiting. The transfer of mobile genetic elements (MGEs) to plants can be ancient or recurrent events, such as plasmids, transposons, and tiny mRNA.
In this context, molecular mechanisms related to the readjustment of nutrient pools for sustained plant growth under harsh conditions are discussed. Growth is carefully mediated via active control of the wall’s mechanical properties, altering either the yield or the yield of nutrient pools.
Mobile elements have played a crucial role in shaping the architecture and gene contents of fungal genomes. Transposable elements are dynamic components of plant genomes, displaying a high diversity of lineages and distribution due to evolutionary driving. Nutrients that are mobile in the plant will move to new growth areas, so deficiency symptoms will first show up in older leaves. Many genes carried by mobile elements code for traits expressed outside of the cell, which are involved in bacterial sociality.
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What factors are most influential in the growth of a plant?
Light is crucial for plant growth, but other environmental factors like temperature, moisture, nutrient availability, and soil type also play a role. Accurate and quick measurements are essential for understanding how light interacts with other resources to influence plant growth in the wild or on farms. Light is essential for photosynthesis, which produces simple sugars by combining water from roots with carbon dioxide from leaf stomata. This process also produces proteins, fats, pigments, and fibers.
The photosynthetically active radiation, which is the visible light spectrum between 400-700 nm, is vital for photosynthesis. Increased solar radiation can raise ambient and soil temperatures, which can decrease moisture availability for plants. Temperature in plants can influence various physiological processes. Overall, understanding the interactions between light and other environmental factors is essential for advancing research in this area.
What is the impact factor of mobile DNA?
Mobile DNA is a peer-reviewed open access scientific journal published by BioMed Central, focusing on genomics and transposable elements in DNA. It was established in 2010 and has a 2022 impact factor of 4. 9. The current editors-in-chief are Irina Arkhipova, Kathleen Burns, and Pascale Lesage. Previous editors include Marlene Belfort, Cédric Feschotte, Henry Levin, and Haig Kazazian. The journal has a 2022 impact factor of 4. 9 and has published articles on the subject. The late Haig Kazazian was a prominent figure in the field of genomics.
What do mobile genetic elements do?
Mobile genetic elements (MGEs), also known as selfish genetic elements, are a type of genetic material that can move within a genome or be transferred from one species or replicon to another. They are found in all organisms, with approximately 50 of the human genome being composed of MGEs. MGEs play a distinct role in evolution, causing gene duplication events, mutations in protein coding regions, and rearrangement of genes in the host genome.
These mechanisms can increase fitness by gaining new or additional functions, such as virulence factors and antibiotic resistance genes. However, they can also decrease fitness by introducing disease-causing alleles or mutations.
The set of MGEs in an organism is called a mobilome, which is composed of a large number of plasmids, transposons, and viruses. Plasmids are circular extrachromosomal DNA molecules that replicate and are transmitted independently from chromosomal DNA. Fitness of a plasmid is determined by its mobility, which includes its ability to replicate DNA and horizontally transfer genes during their cycle. Some plasmids employ membrane-associated mating pair formation (MPF), making them self-transmitting or conjugative.
Cloning vectors are hybrid plasmids with bacteriophages used to transfer and replicate DNA. A viable vector must be able to replicate together with the DNA fragments it carries, containing desired genes for insertion into an organism’s genome. Examples of cosmids and phagemids are examples of MGEs.
What is the role of mobile genetic elements in microbial evolution?
Mobile elements are diverse in nature, preservation strategies, and transfer mechanisms among genomes. The democratization of Next Generation Sequencing is increasing the number of whole-genomes available, allowing a better understanding of the true dimension of the bacterial mobilome. Mobile elements can potentiate gene gain and loss, affecting bacterial fitness and contributing to genetic adaptation to new environments. However, the mechanisms of persistence and interaction of mobile elements with the host and their impact on bacterial evolution and adaptability remain poorly understood.
This Research Topic welcomes articles focusing on characteristics and detection methods, comparative genomics, biotechnology applications, and the role of bacterial mobile elements in bacterial evolution and adaptability. The topics include the genetic composition, prevalence, biological function, bioinformatics tools, biotechnology applications, and the role of bacterial mobile elements in bacterial evolution and adaptability.
What causes poor root growth in plants?
Low soil pH can lead to poor root growth and magnesium deficiency, while excessive nutrient leaching from heavy rainfall can significantly reduce plant growth. English is the language of control for this page, and when there is a conflict between translation to English and translation, English prevails. A translation service is available for free to convert the page to Spanish. However, the translation may not be relevant to the context and may not accurately translate the text. NC State Extension does not guarantee the accuracy of the translated text, and some applications and services may not function as expected when translated.
What is the significance of mobile genetic elements in microbial genomes and their impact on the evolution and adaptation of microorganisms?
This mini-review discusses the role of mobile genetic elements (MGEs) in horizontal gene transfer (HGT) in bacteria, focusing on the behavior of conjugative plasmids in different environments and conditions. MGEs, including plasmids, integrative and conjugative elements, transposons, insertion sequences, and bacteriophages, play a crucial role in bacterial evolution and adaptation. The spread of antimicrobial resistance genes (ARGs), which pose a serious threat to public health, is primarily attributable to HGT through MGEs.
MGEs are DNA molecules capable of moving between replicons (intracellular mobility) or between bacterial cells (intercellular mobility). They carry various genes, including antimicrobial and metal resistance, virulence, and catabolic genes. Recently, antimicrobial-resistant (AMR) bacteria have become a serious threat to public health. ARGs are spread through HGT of ARG-associated MGEs, and MGEs promote the diversification of AMR bacteria.
Understanding the mechanisms by which microbes exchange their genes via HGT under different conditions would provide important insights into bacterial evolution and adaptation, as well as the epidemiological basis for the spread of ARGs. This mini-review aims to provide a comprehensive summary of the characteristics of MGEs and recent research findings on microbial evolution through HGT in various environments.
What are the factors affecting growth in botany?
Environmental factors such as light, temperature, water, humidity, and nutrition significantly impact plant growth and development. Understanding these factors allows for manipulation of plants for increased leaf, flower, or fruit production and diagnosing environmental stress-related plant problems. Light quantity, which refers to the intensity of sunlight, varies with seasons, with the maximum amount in summer and minimum in winter. The more sunlight a plant receives, the greater its capacity for photosynthesis, and understanding these factors can help in addressing plant growth and development needs.
What are the factors affecting plant root growth?
Environmental conditions like water availability, temperature, light intensity, and nutrient availability can impact root growth by affecting carbohydrate supply to the roots. Root growth is often closely related to light intensity. This relationship is evident in the study of photosynthesis, which is crucial for plant growth. The study also mentions the use of cookies on the site, and the Creative Commons licensing terms apply for open access content.
What role do mobile elements play in the evolution of genomes?
Mobile elements significantly influence the structure and gene content of fungal genomes. Sequencing from various fungal species reveals that invasions and expansions of mobile genetic elements have varying effects on genome evolution. This information is supported by ScienceDirect’s shopping cart, terms and conditions, and privacy policy. All rights reserved, including those for text and data mining, AI training, and similar technologies. Creative Commons licensing terms apply for open access content.
Can transposable elements increase the genome size of an organism?
Genome sizes of eukaryotic organisms vary significantly, with whole-genome duplications (WGD) and transposable element expansion being the main drivers for rapid genome size increase. The two North American mudminnows, Umbra limi and Umbra pygmaea, feature genomes about twice the size of their sister lineage Esocidae, such as pikes and pickerels. However, it is unknown whether all Umbra species share this genome expansion and which causal mechanisms drive this expansion.
The European mudminnow’s genome is expanded similarly to both North American species, ranging between 4. 5 and 5. 4 pg per diploid nucleus. Observed blocks of interstitially located telomeric repeats in U. limi suggest frequent Robertsonian rearrangements in its history. Comparative analyses of transcriptome and genome assemblies show that the genome expansion in Umbra is driven by the expansion of DNA transposon and unclassified repeat sequences without WGD.
Furthermore, a substantial ongoing expansion of repeat sequences in the Alaska blackfish Dallia pectoralis, the closest relative to the family Umbridae, might mark the beginning of a similar genome expansion.
The study suggests that the genome expansion in mudminnows, driven mainly by transposon expansion, but not WGD, occurred before the separation into the American and European lineage. Genome sizes vary substantially across different taxa, including the smallest and largest vertebrate genomes. The main candidate processes introducing such drastic variation are gene or genome duplication, transposable element (TE) proliferation, and replication slippage at tandem repeat loci.
It is unclear whether this variation is shaped by adaptive processes or stochastic sequence gain and loss. Estimates of the pervasiveness and extent of expansion events caused by TE proliferation and other processes will provide insight into the forces that shape genome size evolution.
Does genetic exchange occur between mobile genetic elements?
Mobile genetic elements (MGEs) enable genes to move within and between genomes at fast rates, often carrying genes beneficial for their hosts or their neighbors. Horizontal gene transfer (HGT) is a process where microorganisms transfer genes horizontally, independently of reproduction events. This concept has gained attention in recent years, with some describing it as “biology’s next revolution”.
Prokaryotic genomes vary in the rates of gene gain and loss, with most prokaryotes being highly dynamic with high rates of gene gain and loss. Non-core genes contribute significantly to the overall diversity of gene repertoires in a species, which together with the core are known as the pan-genome. In a study of E. coli, non-core genes made up 90 of the pan-genome when 20 strains were put together.
Despite the widespread attention given to HGT, the adaptive significance of horizontally transferred genes remains to be fully addressed. There are increasing hints of important separations of functions between the vertically transmitted core genome, which encodes fundamental cellular processes, and the horizontally transmissible accessory genome, which encodes for a variety of secondary metabolites conferring resistance to specific toxins or antibiotics or the ability to exploit a specific niche.
The accessory genome contains recently acquired functions, mobile genetic elements (MGEs), non-expressed genes, and genes under particular modes of selection such as diversifying selection, frequency-dependent selection, and periodic selection.
Despite extensive research into the molecular mechanisms of HGT, the ecological and evolutionary forces that drive these basic divisions of mobility and function remain poorly understood.
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